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  • Top cofit genes for GFF2440 from Variovorax sp. SCN45

    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7263 Malate dehydrogenase (EC 1.1.1.37) no 0.53
    2 GFF5295 Ferrichrome-iron receptor no 0.52
    3 GFF1330 UPF0061 protein YdiU no 0.52
    4 GFF3992 HNH endonuclease family protein no 0.52
    5 GFF3528 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) no 0.49
    6 GFF2738 hypothetical protein no 0.48
    7 GFF1551 hypothetical protein no 0.48
    8 GFF3707 ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) no 0.48
    9 GFF2335 Lactoylglutathione lyase and related lyases no 0.48
    10 GFF4910 hypothetical protein no 0.48
    11 GFF6957 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) no 0.48
    12 GFF2314 hypothetical protein no 0.47
    13 GFF3179 hypothetical protein no 0.47
    14 GFF6219 hypothetical protein no 0.47
    15 GFF6859 Two-component transcriptional response regulator, OmpR family no 0.46
    16 GFF6313 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.46
    17 GFF304 Ubiquinone/menaquinone biosynthesis methyltransferase family protein no 0.45
    18 GFF5765 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) no 0.45
    19 GFF3990 hypothetical protein no 0.45
    20 GFF6746 dolichyl-phosphate-mannose-protein mannosyltransferase family protein no 0.45

    Or look for negative cofitness