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  • Top cofit genes for GFF2425 from Sphingobium sp. HT1-2

    Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage
    SEED: Membrane-associated zinc metalloprotease
    KEGG: regulator of sigma E protease

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3947 hypothetical protein no 0.89
    2 GFF1710 hypothetical protein no 0.85
    3 GFF1187 Response regulator NasT no 0.83
    4 GFF408 TonB-dependent receptor no 0.78
    5 GFF616 Glycosyl transferase, group 1 no 0.78
    6 GFF523 hypothetical protein no 0.77
    7 GFF3457 hypothetical protein no 0.77
    8 GFF4616 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.77
    9 GFF942 hypothetical protein no 0.76
    10 GFF4541 UPF0070 protein YfgM no 0.76
    11 GFF35 hypothetical protein no 0.76
    12 GFF1139 Efflux ABC transporter, permease/ATP-binding protein no 0.76
    13 GFF2977 RND efflux system, inner membrane transporter no 0.76
    14 GFF4422 Sulfate permease no 0.74
    15 GFF1287 Ribosyl nicotinamide transporter, PnuC-like no 0.74
    16 GFF2143 UPF0118 membrane protein SMc00793 no 0.73
    17 GFF3447 Efflux ABC transporter, permease protein 0.40 0.73
    18 GFF526 benzoate MFS transporter BenK no 0.73
    19 GFF3491 hypothetical protein no 0.72
    20 GFF2476 hypothetical protein no 0.72

    Or look for negative cofitness