• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF2424 from Variovorax sp. SCN45

    ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron)
    SEED: Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)
    KEGG: putative spermidine/putrescine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1110 Recombination protein RecR 0.51 0.56
    2 GFF3145 Two-component system response regulator QseB no 0.56
    3 GFF4843 Conjugative transfer protein TrbF no 0.55
    4 GFF6995 Flagellar M-ring protein FliF no 0.54
    5 GFF1423 Phenylacetate ABC transporter, permease protein 1 no 0.54
    6 GFF1681 Methylisocitrate lyase (EC 4.1.3.30) no 0.54
    7 GFF2214 Flp pilus assembly protein, pilin Flp no 0.52
    8 GFF629 hypothetical protein no 0.51
    9 GFF4672 Exoenzymes regulatory protein AepA precursor no 0.51
    10 GFF6241 Transglutaminase-like domain no 0.51
    11 GFF4828 no description no 0.51
    12 GFF4072 hypothetical protein no 0.49
    13 GFF323 Possible pyrimidine-degrading protein DUF1688 no 0.48
    14 GFF1934 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.48
    15 GFF1632 RNA polymerase ECF-type sigma factor no 0.47
    16 GFF5244 General secretion pathway protein G no 0.47
    17 GFF4765 ADP-ribose pyrophosphatase (EC 3.6.1.13) no 0.47
    18 GFF5143 no description no 0.46
    19 GFF2430 Protein secretion chaperonin CsaA no 0.46
    20 GFF1220 Transcriptional regulator, MerR family no 0.46

    Or look for negative cofitness