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  • Top cofit genes for GFF2423 from Variovorax sp. SCN45

    Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)
    SEED: Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2917 Gluconolactonase (EC 3.1.1.17) no 0.54
    2 GFF173 Hexuronate utilization operon transcriptional repressor ExuR 0.13 0.54
    3 GFF767 Alpha-amylase (EC 3.2.1.1) no 0.53
    4 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.53 0.53
    5 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) no 0.52
    6 GFF4431 Multi-sensor signal transduction histidine kinase no 0.50
    7 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA no 0.49
    8 GFF3272 Inner membrane protein, KefB/KefC family no 0.49
    9 GFF937 Biotin synthase (EC 2.8.1.6) no 0.49
    10 GFF2847 histone-like nucleoid-structuring protein H-NS no 0.49
    11 GFF4670 Transcriptional regulator, AcrR family no 0.49
    12 GFF5267 Glucose-6-phosphate isomerase (EC 5.3.1.9) no 0.49
    13 GFF4070 no description no 0.49
    14 GFF5968 no description no 0.48
    15 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) no 0.48
    16 GFF2027 2-hydroxychromene-2-carboxylate isomerase family protein no 0.48
    17 GFF1386 Uncharacterized transporter YebQ, major facilitator superfamily (MFS) no 0.48
    18 GFF774 no description no 0.47
    19 GFF781 hypothetical protein no 0.46
    20 GFF244 Cys regulon transcriptional activator CysB no 0.46

    Or look for negative cofitness