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  • Top cofit genes for GFF2422 from Variovorax sp. SCN45

    Polysaccharide deacetylase
    SEED: Polysaccharide deacetylase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7364 no description no 0.68
    2 GFF2205 hypothetical protein no 0.67
    3 GFF2367 Transcriptional regulator, LysR family no 0.66
    4 GFF5946 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA no 0.63
    5 GFF3466 FIG00932805: hypothetical protein no 0.62
    6 GFF2136 Ribokinase (EC 2.7.1.15) no 0.62
    7 GFF3864 Sigma factor RpoE negative regulatory protein RseA no 0.61
    8 GFF7086 Transcriptional regulator, IclR family no 0.61
    9 GFF299 Ribosomal silencing factor RsfA no 0.60
    10 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) no 0.57
    11 GFF900 hypothetical protein no 0.57
    12 GFF1187 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) no 0.57
    13 GFF1003 HflC protein no 0.56
    14 GFF1451 FIG00456379: hypothetical protein no 0.56
    15 GFF126 Repressor homolog no 0.56
    16 GFF1969 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.56
    17 GFF6870 FIG00904791: hypothetical protein no 0.56
    18 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.56
    19 GFF268 Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.56
    20 GFF3118 Membrane alanine aminopeptidase N (EC 3.4.11.2) no 0.55

    Or look for negative cofitness