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Cofit
Protein
Homologs
Top cofit genes for GFF2406 from
Variovorax sp. SCN45
DipZ protein
SEED: DipZ protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5235
General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD)
no
0.65
2
GFF5402
Transcriptional regulator, IclR family
no
0.60
3
GFF1260
no description
no
0.58
4
GFF3456
Possible regulatory protein similar to urea ABC transporter, substrate binding protein
no
0.57
5
GFF2098
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.55
6
GFF4249
hypothetical protein
no
0.54
7
GFF6112
Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1)
no
0.54
8
GFF6407
Phytanoyl-CoA dioxygenase
0.28
0.52
9
GFF2212
KEGG: prepilin peptidase CpaA
no
0.51
10
GFF335
Cytosine deaminase (EC 3.5.4.1)
no
0.50
11
GFF5583
Transcriptional regulator PA0181, LysR family
no
0.50
12
GFF4671
putative membrane protein
no
0.49
13
GFF5000
PUTATIVE ZINC PROTEASE PROTEIN
no
0.49
14
GFF2201
hypothetical protein
no
0.49
15
GFF5952
no description
no
0.49
16
GFF5233
General secretion pathway protein F / Type II secretory pathway, component PulF
no
0.48
17
GFF6873
Aminotransferase, DegT/DnrJ/EryC1/StrS family
no
0.48
18
GFF3032
Two-component transcriptional response regulator, LuxR family
no
0.48
19
GFF36
Similar to Agmatine deiminase
no
0.47
20
GFF4810
Ferrichrome-iron receptor
no
0.47
Or look for
negative cofitness