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  • Top cofit genes for GFF2406 from Variovorax sp. SCN45

    DipZ protein
    SEED: DipZ protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) no 0.65
    2 GFF5402 Transcriptional regulator, IclR family no 0.60
    3 GFF1260 no description no 0.58
    4 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.57
    5 GFF2098 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.55
    6 GFF4249 hypothetical protein no 0.54
    7 GFF6112 Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1) no 0.54
    8 GFF6407 Phytanoyl-CoA dioxygenase 0.28 0.52
    9 GFF2212 KEGG: prepilin peptidase CpaA no 0.51
    10 GFF335 Cytosine deaminase (EC 3.5.4.1) no 0.50
    11 GFF5583 Transcriptional regulator PA0181, LysR family no 0.50
    12 GFF4671 putative membrane protein no 0.49
    13 GFF5000 PUTATIVE ZINC PROTEASE PROTEIN no 0.49
    14 GFF2201 hypothetical protein no 0.49
    15 GFF5952 no description no 0.49
    16 GFF5233 General secretion pathway protein F / Type II secretory pathway, component PulF no 0.48
    17 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.48
    18 GFF3032 Two-component transcriptional response regulator, LuxR family no 0.48
    19 GFF36 Similar to Agmatine deiminase no 0.47
    20 GFF4810 Ferrichrome-iron receptor no 0.47

    Or look for negative cofitness