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  • Top cofit genes for GFF2404 from Variovorax sp. SCN45

    Hypothetical protein with Rieske (2Fe-2S) region
    SEED: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
    KEGG: vanillate monooxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3792 no description no 0.62
    2 GFF7241 no description no 0.56
    3 GFF5714 no description no 0.51
    4 GFF1026 Probable chromate transporter protein no 0.51
    5 GFF5576 Acyl-CoA dehydrogenase no 0.51
    6 GFF3730 Integral membrane protein no 0.50
    7 GFF4270 Transcriptional regulator, AcrR family no 0.50
    8 GFF6337 Ser/Thr protein phosphatase family protein no 0.49
    9 GFF1504 Alkylhydroperoxidase AhpD domain protein no 0.49
    10 GFF900 hypothetical protein no 0.48
    11 GFF5217 Ferric iron ABC transporter, iron-binding protein no 0.48
    12 GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl no 0.47
    13 GFF3782 hypothetical protein no 0.47
    14 GFF1691 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake no 0.47
    15 GFF4465 Transcriptional regulator, LysR family no 0.46
    16 GFF5439 FIG00932072: hypothetical protein no 0.46
    17 GFF3056 Nitrogen assimilation regulatory protein Nac no 0.46
    18 GFF260 FIG00931356: hypothetical protein no 0.46
    19 GFF5072 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like no 0.45
    20 GFF5200 L-arabonate dehydratase (EC 4.2.1.25) no 0.45

    Or look for negative cofitness