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  • Top cofit genes for PS417_12250 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulators, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11170 aldehyde dehydrogenase no 0.21
    2 PS417_09565 DNA polymerase II 0.37 0.20
    3 PS417_26620 malonate decarboxylase subunit alpha no 0.19
    4 PS417_22830 DNA polymerase IV 0.29 0.19
    5 PS417_09900 hypothetical protein no 0.19
    6 PS417_01020 glutamine ABC transporter permease 0.40 0.19
    7 PS417_06365 RNA polymerase sigma factor no 0.18
    8 PS417_12610 RNA polymerase sigma factor no 0.18
    9 PS417_16145 sulfonate ABC transporter permease no 0.17
    10 PS417_26815 peptidase M16 no 0.17
    11 PS417_20955 secretion protein no 0.17
    12 PS417_15335 hypothetical protein no 0.16
    13 PS417_19295 hypothetical protein no 0.16
    14 PS417_03070 LuxR family transcriptional regulator no 0.16
    15 PS417_20360 serine/threonine protein phosphatase no 0.16
    16 PS417_17515 GfdT protein no 0.16
    17 PS417_03125 potassium ABC transporter ATPase 0.51 0.15
    18 PS417_15570 excinuclease ABC subunit A 0.21 0.15
    19 PS417_21355 hypothetical protein no 0.15
    20 PS417_25765 transcriptional regulator no 0.15

    Or look for negative cofitness