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Cofit
Protein
Homologs
Top cofit genes for GFF2402 from
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
RatA homolog
SEED: RatA homolog
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2403
RatA homolog
no
0.66
2
GFF1951
Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p
no
0.60
3
GFF1414
hypothetical protein
no
0.59
4
GFF182
DNA polymerase II (EC 2.7.7.7)
no
0.59
5
GFF4404
Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
no
0.57
6
GFF4386
FIG039061: hypothetical protein related to heme utilization
no
0.57
7
GFF246
putative protein PaaI, possibly involved in aromatic compounds catabolism
no
0.56
8
GFF4135
FIG01047465: hypothetical protein
no
0.55
9
GFF1974
Pyruvate decarboxylase (EC 4.1.1.1); Alpha-keto-acid decarboxylase (EC 4.1.1.-)
no
0.55
10
GFF4474
Outer membrane esterase
no
0.55
11
GFF2015
Periplasmic divalent cation tolerance protein CutA
no
0.54
12
GFF1919
Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1)
no
0.53
13
GFF662
Pectinesterase (EC 3.1.1.11)
no
0.53
14
GFF364
Transcriptional regulator, LysR family
no
0.52
15
GFF328
L-seryl-tRNA(Sec) selenium transferase-related protein
no
0.52
16
GFF1170
IncF plasmid conjugative transfer pilus assembly protein TraU
no
0.52
17
GFF4252
Type III restriction-modification system methylation subunit (EC 2.1.1.72)
no
0.52
18
GFF650
Galactokinase (EC 2.7.1.6)
no
0.52
19
GFF1536
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
no
0.51
20
GFF1375
hypothetical protein
no
0.51
Or look for
negative cofitness