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    • Top cofit genes for GFF2399 from Variovorax sp. SCN45

    TonB-dependent receptor
    SEED: Outer membrane receptor proteins, mostly Fe transport

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3433 hypothetical protein no 0.56
    2 GFF4188 Signal peptidase I (EC 3.4.21.89) no 0.54
    3 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.53
    4 GFF1077 no description no 0.51
    5 GFF6138 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 no 0.51
    6 GFF803 MutT/Nudix family protein no 0.51
    7 GFF3145 Two-component system response regulator QseB no 0.49
    8 GFF6932 no description no 0.49
    9 GFF1977 L-asparaginase (EC 3.5.1.1) no 0.48
    10 GFF6927 Transcriptional regulator, ArsR family no 0.48
    11 GFF3776 no description no 0.48
    12 GFF1481 L-carnitine dehydratase/bile acid-inducible protein F no 0.47
    13 GFF5764 hypothetical protein no 0.45
    14 GFF3671 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.45
    15 GFF2333 hypothetical protein no 0.45
    16 GFF4074 Multicopper oxidase no 0.44
    17 GFF3389 Glycosyl transferases, related to UDP-glucuronosyltransferase no 0.44
    18 GFF4785 AttF component of AttEFGH ABC transport system / AttG component of AttEFGH ABC transport system no 0.44
    19 GFF2625 hypothetical protein no 0.44
    20 GFF6251 hypothetical protein no 0.43

    Or look for negative cofitness