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  • Top cofit genes for GFF2397 from Variovorax sp. SCN45

    Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF10 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.58
    2 GFF6097 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) no 0.56
    3 GFF4980 Transcriptional regulator, AsnC family no 0.55
    4 GFF3470 Permease of the drug/metabolite transporter (DMT) superfamily no 0.54
    5 GFF2112 no description no 0.54
    6 GFF4228 2-hydroxychromene-2-carboxylate isomerase no 0.54
    7 GFF4847 Conjugative transfer protein TrbD no 0.54
    8 GFF2381 Ribonuclease PH (EC 2.7.7.56) no 0.53
    9 GFF7221 Protein lysine acetyltransferase Pat (EC 2.3.1.-) no 0.53
    10 GFF3471 hypothetical protein no 0.53
    11 GFF1574 Alpha-aminoadipate aminotransferase (EC 2.6.1.39) @ Leucine transaminase (EC 2.6.1.6) @ Valine transaminase no 0.53
    12 GFF20 hypothetical protein no 0.53
    13 GFF5589 Methionine aminopeptidase (EC 3.4.11.18) no 0.53
    14 GFF4259 Transcriptional regulator, DeoR family no 0.52
    15 GFF3101 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein no 0.52
    16 GFF5843 hypothetical protein no 0.50
    17 GFF3410 Transcriptional regulator, AraC family no 0.50
    18 GFF2664 FIG002343: hypothetical protein no 0.49
    19 GFF4212 Methionine gamma-lyase (EC 4.4.1.11) no 0.49
    20 GFF1585 Outer membrane porin protein 32 precursor no 0.49

    Or look for negative cofitness