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  • Top cofit genes for PS417_12210 from Pseudomonas simiae WCS417

    ABC transporter substrate-binding protein
    SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
    KEGG: microcin C transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_15485 amino acid ABC transporter permease no 0.30
    2 PS417_25305 peptide ABC transporter permease no 0.28
    3 PS417_04550 hypothetical protein no 0.26
    4 PS417_13480 serine protease no 0.26
    5 PS417_19645 chemotaxis protein no 0.26
    6 PS417_11175 AraC family transcriptional regulator no 0.26
    7 PS417_24385 tRNA (uracil-5-)-methyltransferase 0.26 0.24
    8 PS417_27335 flagellar basal body protein FliL 0.46 0.24
    9 PS417_05075 serine dehydratase no 0.24
    10 PS417_04545 hypothetical protein 0.42 0.24
    11 PS417_11060 transporter no 0.24
    12 PS417_22535 ornithine acetyltransferase 0.44 0.23
    13 PS417_09865 hypothetical protein no 0.23
    14 PS417_03905 fimbrial protein no 0.22
    15 PS417_05450 GNAT family acetyltransferase no 0.22
    16 PS417_23435 serine/threonine protein kinase no 0.22
    17 PS417_12530 LysR family transcriptional regulator no 0.22
    18 PS417_26170 formyltetrahydrofolate deformylase 0.40 0.22
    19 PS417_14680 LysR family transcriptional regulator 0.19 0.22
    20 PS417_13280 TonB-dependent receptor no 0.22

    Or look for negative cofitness