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  • Top cofit genes for PS417_12175 from Pseudomonas simiae WCS417

    peptide ABC transporter permease
    SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
    KEGG: microcin C transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17800 microcin B17-processing protein McbD no 0.27
    2 PS417_00615 hypothetical protein no 0.24
    3 PS417_15495 FAD-dependent oxidoreductase no 0.24
    4 PS417_17715 actin no 0.24
    5 PS417_16295 hypothetical protein no 0.24
    6 PS417_20850 hypothetical protein 0.11 0.23
    7 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase no 0.23
    8 PS417_06515 beta-agarase 0.26 0.23
    9 PS417_25370 hypothetical protein no 0.23
    10 PS417_21680 succinylglutamate desuccinylase no 0.23
    11 PS417_05400 hypothetical protein no 0.23
    12 PS417_00245 oligopeptidase A no 0.23
    13 PS417_12815 diguanylate cyclase no 0.22
    14 PS417_08305 transcriptional regulator no 0.22
    15 PS417_19825 ATPase AAA 0.50 0.22
    16 PS417_02765 phosphate starvation-inducible protein PsiF no 0.22
    17 PS417_19840 flagellar cap protein FliD 0.44 0.22
    18 PS417_21555 flagellar hook protein FlgE 0.54 0.22
    19 PS417_27990 hypothetical protein no 0.22
    20 PS417_28450 XRE family transcriptional regulator no 0.21

    Or look for negative cofitness