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  • Top cofit genes for PS417_12170 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
    KEGG: microcin C transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19265 membrane protein no 0.41
    2 PS417_12180 ABC transporter substrate-binding protein 0.70 0.40
    3 PS417_12205 hypothetical protein 0.58 0.38
    4 PS417_12195 ABC transporter permease 0.59 0.37
    5 PS417_16500 arginyl-tRNA-protein transferase no 0.36
    6 PS417_04285 protease TldD no 0.36
    7 PS417_20660 hypothetical protein no 0.35
    8 PS417_16990 acyl-CoA dehydrogenase no 0.35
    9 PS417_20655 group 1 glycosyl transferase no 0.35
    10 PS417_06515 beta-agarase 0.23 0.34
    11 PS417_12200 microcin ABC transporter permease 0.50 0.33
    12 PS417_16005 ATPase 0.44 0.33
    13 PS417_25835 hypothetical protein 0.32 0.33
    14 PS417_17240 trigger factor no 0.32
    15 PS417_20670 glycosyl transferase family 2 no 0.32
    16 PS417_04270 ribonuclease G no 0.32
    17 PS417_25840 SpoVR family protein no 0.32
    18 PS417_00335 cytochrome B561 0.61 0.32
    19 PS417_00305 cytochrome oxidase subunit I no 0.31
    20 PS417_03310 carbonate dehydratase no 0.31

    Or look for negative cofitness