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  • Top cofit genes for PS417_12140 from Pseudomonas simiae WCS417

    histidine kinase
    SEED: Histidine kinase/response regulator hybrid protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25320 dTDP-4-dehydrorhamnose reductase 0.71 0.32
    2 PS417_00445 histidine kinase 0.67 0.24
    3 PS417_01355 membrane protein no 0.24
    4 PS417_00315 MFS transporter no 0.23
    5 PS417_25045 hypothetical protein no 0.21
    6 PS417_16875 signal peptidase no 0.21
    7 PS417_01710 histidine utilization repressor no 0.21
    8 PS417_23830 hypothetical protein 0.28 0.20
    9 PS417_26655 chemotaxis protein no 0.20
    10 PS417_26645 chemotaxis protein 0.40 0.20
    11 PS417_18355 DNA-binding protein no 0.20
    12 PS417_00385 Fur family transcriptional regulator no 0.19
    13 PS417_03450 RNA polymerase sigma factor no 0.19
    14 PS417_22520 histidine kinase 0.49 0.19
    15 PS417_26650 histidine kinase 0.47 0.19
    16 PS417_01885 poly(3-hydroxyalkanoate) granule-associated protein PhaF no 0.19
    17 PS417_22500 porin no 0.18
    18 PS417_06790 arabinose transporter permease no 0.18
    19 PS417_11900 conjugal transfer protein TraR 0.45 0.18
    20 PS417_08990 ABC transporter substrate-binding protein 0.32 0.17

    Or look for negative cofitness