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  • Top cofit genes for PS417_12135 from Pseudomonas simiae WCS417

    peptidylprolyl isomerase
    SEED: Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8)
    KEGG: peptidyl-prolyl cis-trans isomerase C

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24500 DEAD/DEAH box helicase 0.22 0.32
    2 PS417_26370 RNA helicase no 0.30
    3 PS417_08530 spermidine synthase 0.21 0.29
    4 PS417_04290 hypothetical protein 0.32 0.27
    5 PS417_01340 agmatine deiminase no 0.26
    6 PS417_20635 ABC transporter ATP-binding protein no 0.26
    7 PS417_24335 50S rRNA methyltransferase 0.21 0.25
    8 PS417_06135 glycerol-3-phosphate acyltransferase no 0.24
    9 PS417_14835 amidase 0.54 0.24
    10 PS417_22250 pseudouridine synthase no 0.24
    11 PS417_21630 magnesium transporter no 0.24
    12 PS417_05820 recombinase RecX no 0.23
    13 PS417_03005 arginine decarboxylase no 0.23
    14 PS417_05660 (4Fe-4S)-binding protein no 0.23
    15 PS417_20650 hypothetical protein no 0.23
    16 PS417_20930 50S rRNA methyltransferase no 0.22
    17 PS417_08190 membrane protein no 0.22
    18 PS417_25100 hypothetical protein no 0.22
    19 PS417_08245 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase no 0.22
    20 PS417_04285 protease TldD 0.61 0.21

    Or look for negative cofitness