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  • Top cofit genes for GFF2379 from Variovorax sp. SCN45

    Serine/threonine protein kinase
    SEED: Serine/threonine protein kinase (EC 2.7.11.1)
    KEGG:

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4485 FIG00715336: hypothetical protein 1.00 1.00
    2 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.98 0.98
    3 GFF2510 Type IV fimbrial assembly, ATPase PilB 0.99 0.98
    4 GFF5490 Uncharacterized protein with LysM domain, COG1652 0.99 0.98
    5 GFF5320 Type IV pilus biogenesis protein PilN 0.98 0.98
    6 GFF5322 Type IV pilus biogenesis protein PilP 0.99 0.98
    7 GFF5323 Type IV pilus biogenesis protein PilQ 0.99 0.98
    8 GFF5419 Type IV pilus biogenesis protein PilE 0.65 0.98
    9 GFF2509 Type IV fimbrial assembly protein PilC 0.99 0.98
    10 GFF5414 hypothetical protein no 0.98
    11 GFF2151 twitching motility protein PilG 0.97 0.98
    12 GFF5321 Type IV pilus biogenesis protein PilO 0.99 0.97
    13 GFF5319 Type IV pilus biogenesis protein PilM 0.99 0.97
    14 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.97
    15 GFF5417 hypothetical protein no 0.97
    16 GFF3826 Response regulator receiver:LytTr DNA-binding region 0.96 0.97
    17 GFF33 Type IV pilus biogenesis protein PilZ 0.98 0.97
    18 GFF2154 twitching motility protein PilJ 0.96 0.97
    19 GFF993 Type IV pilus biogenesis protein PilF 0.94 0.97
    20 GFF5416 Type IV fimbrial biogenesis protein PilW no 0.97

    Or look for negative cofitness