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  • Top cofit genes for PS417_12105 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: Amino acid ABC transporter, permease protein
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12100 amino acid ABC transporter permease 0.92 0.29
    2 PS417_24155 ATP-binding protein no 0.23
    3 PS417_01255 thioesterase no 0.23
    4 PS417_12095 ABC transporter substrate-binding protein 0.92 0.23
    5 PS417_22580 membrane protein no 0.22
    6 PS417_17100 spore coat protein no 0.21
    7 PS417_12125 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) 0.79 0.20
    8 PS417_28260 VdlD 0.66 0.20
    9 PS417_22070 long-chain fatty acid--CoA ligase no 0.19
    10 PS417_15850 alcohol dehydrogenase no 0.19
    11 PS417_17945 hypothetical protein no 0.19
    12 PS417_18215 AraC family transcriptional regulator no 0.19
    13 PS417_08485 alpha/beta hydrolase no 0.19
    14 PS417_23770 exodeoxyribonuclease V subunit alpha 0.47 0.18
    15 PS417_03060 pilus assembly protein TadE no 0.18
    16 PS417_28410 acyl-phosphate glycerol 3-phosphate acyltransferase no 0.17
    17 PS417_20985 porin no 0.17
    18 PS417_27800 exodeoxyribonuclease III no 0.17
    19 PS417_10000 phage antirepressor protein no 0.17
    20 PS417_27980 ATPase AAA no 0.16

    Or look for negative cofitness