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  • Top cofit genes for PS417_12100 from Pseudomonas simiae WCS417

    amino acid ABC transporter permease
    SEED: amino acid ABC transporter, permease protein
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01355 membrane protein 0.17 0.30
    2 PS417_12105 ABC transporter permease 0.92 0.29
    3 PS417_12095 ABC transporter substrate-binding protein 0.96 0.28
    4 PS417_12125 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) 0.82 0.26
    5 PS417_20155 23S rRNA methyltransferase 0.09 0.19
    6 PS417_15245 PTS sugar transporter subunit IIC no 0.19
    7 PS417_23830 hypothetical protein 0.23 0.18
    8 PS417_21125 phosphoadenosine phosphosulfate reductase no 0.17
    9 PS417_03160 metal ABC transporter ATPase no 0.17
    10 PS417_14555 AsnC family transcriptional regulator no 0.17
    11 PS417_22700 RNA polymerase subunit sigma-24 no 0.17
    12 PS417_24235 hypothetical protein no 0.17
    13 PS417_22715 heme oxygenase no 0.17
    14 PS417_27325 multidrug ABC transporter ATP-binding protein no 0.16
    15 PS417_21895 nuclease PIN no 0.16
    16 PS417_12190 microcin ABC transporter ATP-binding protein no 0.16
    17 PS417_01340 agmatine deiminase no 0.16
    18 PS417_07375 ribonuclease D no 0.16
    19 PS417_10580 glutamine synthetase no 0.16
    20 PS417_20790 adenine phosphoribosyltransferase no 0.16

    Or look for negative cofitness