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  • Top cofit genes for GFF2371 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7315 no description no 0.66
    2 GFF7376 Transcriptional regulator, LysR family no 0.59
    3 GFF6571 Conjugative transfer protein TrbI no 0.58
    4 GFF1515 Flagellar hook-length control protein FliK no 0.58
    5 GFF1985 Zinc metalloprotease no 0.58
    6 GFF374 Transcription elongation factor GreA no 0.56
    7 GFF348 Superoxide dismutase [Fe] (EC 1.15.1.1) no 0.56
    8 GFF6621 Mobile element protein no 0.55
    9 GFF836 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.55
    10 GFF1256 Probable NADH dehydrogenase/NAD(P)H nitroreductase no 0.54
    11 GFF6031 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.54
    12 GFF4907 NAD(P) transhydrogenase C-domain of subunit alpha (EC 1.6.1.2) no 0.54
    13 GFF5422 putative membrane protein no 0.53
    14 GFF2543 Uncharacterized membrane protein Bcep18194_A6058 no 0.53
    15 GFF2320 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) no 0.53
    16 GFF2383 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW no 0.52
    17 GFF2049 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) no 0.52
    18 GFF3018 VgrG protein no 0.52
    19 GFF2932 Uncharacterized protein YeaG no 0.51
    20 GFF5318 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) no 0.51

    Or look for negative cofitness