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  • Top cofit genes for PS417_12075 from Pseudomonas simiae WCS417

    DNA-binding protein
    SEED: Putative transcriptional regulator of sorbose uptake and utilization genes

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21320 transcriptional regulator no 0.34
    2 PS417_11845 RpiR family transcriptional regulator no 0.33
    3 PS417_18690 aromatic amino acid aminotransferase 0.31 0.32
    4 PS417_22190 diguanylate cyclase 0.73 0.30
    5 PS417_04415 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) no 0.29
    6 PS417_27835 endoribonuclease no 0.29
    7 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.28
    8 PS417_26995 phosphoserine phosphatase no 0.28
    9 PS417_17505 LuxR family transcriptional regulator no 0.28
    10 PS417_19145 membrane protein 0.73 0.28
    11 PS417_05595 ornithine carbamoyltransferase no 0.27
    12 PS417_02520 chemotaxis protein no 0.27
    13 PS417_21575 chemotaxis protein 0.40 0.26
    14 PS417_19645 chemotaxis protein no 0.26
    15 PS417_18540 colicin V production CvpA no 0.26
    16 PS417_23805 acetolactate synthase 3 regulatory subunit no 0.26
    17 PS417_26740 homoserine acetyltransferase 0.31 0.26
    18 PS417_27435 polyphosphate kinase no 0.25
    19 PS417_06645 RNA polymerase-associated protein RapA no 0.25
    20 PS417_02210 diguanylate cyclase no 0.25

    Or look for negative cofitness