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  • Top cofit genes for PS417_12060 from Pseudomonas simiae WCS417

    xylitol ABC transporter, permease component (from data)
    Original annotation: sugar ABC transporter permease
    SEED: Inositol transport system permease protein
    KEGG: ribose transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12040 dihydroxyacetone kinase no 0.31
    2 PS417_12065 xylitol ABC transporter, ATPase component (from data) no 0.27
    3 PS417_12055 xylitol ABC transporter, substrate-binding component (from data) 0.50 0.27
    4 PS417_17720 xylitol 2-dehydrogenase (EC 1.1.1.9) (from data) no 0.27
    5 PS417_17725 ribose ABC transporter permease no 0.25
    6 PS417_13330 autotransporter no 0.23
    7 PS417_17735 LacI family transcriptional regulator no 0.22
    8 PS417_05895 membrane protein no 0.20
    9 PS417_14970 MFS transporter no 0.20
    10 PS417_15355 sigma factor sigB regulation protein rsbQ no 0.20
    11 PS417_05005 penicillin-binding protein no 0.20
    12 PS417_03940 membrane protein no 0.19
    13 PS417_14945 beta-lactamase no 0.19
    14 PS417_03130 hypothetical protein no 0.19
    15 PS417_04280 carbon-nitrogen hydrolase no 0.18
    16 PS417_20500 hypothetical protein no 0.18
    17 PS417_14535 alpha/beta hydrolase no 0.18
    18 PS417_13985 dehydrogenase no 0.18
    19 PS417_11315 hemagglutinin no 0.17
    20 PS417_12050 short-chain dehydrogenase no 0.17

    Or look for negative cofitness