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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF2363 from
Hydrogenophaga sp. GW460-11-11-14-LB1
Mobile element protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1829
5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
no
0.57
2
GFF2627
Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
no
0.54
3
GFF1974
Probable hemagglutinin-related transmembrane protein
no
0.54
4
GFF478
Acyclic terpenes utilization regulator AtuR, TetR family
no
0.50
5
GFF5250
Probable transmembrane protein
no
0.50
6
GFF35
Alkaline phosphatase (EC 3.1.3.1)
no
0.50
7
GFF3473
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
no
0.50
8
GFF87
hypothetical protein
no
0.49
9
GFF2859
LysR-family transcriptional regulator
no
0.49
10
GFF2809
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3)
no
0.49
11
GFF693
Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
no
0.48
12
GFF3869
Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-)
no
0.48
13
GFF484
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
no
0.47
14
GFF1990
Acetoacetyl-CoA synthetase (EC 6.2.1.16)
no
0.47
15
GFF689
Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
no
0.47
16
GFF1501
Transcriptional regulator, LacI family
no
0.46
17
GFF697
Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA
no
0.46
18
GFF580
TldD protein, part of TldE/TldD proteolytic complex
no
0.46
19
GFF4077
Flagellar basal-body rod protein FlgG
no
0.46
20
GFF5050
TPR repeat
no
0.46
Or look for
negative cofitness