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  • Top cofit genes for PS417_12030 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: LysR family transcriptional regulator YnfL

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06630 diguanylate phosphodiesterase no 0.19
    2 PS417_14265 phosphate ABC transporter permease no 0.19
    3 PS417_13620 thermostable hemolysin no 0.18
    4 PS417_23415 AraC family transcriptional regulator no 0.17
    5 PS417_08955 pimeloyl-CoA dehydrogenase no 0.17
    6 PS417_20755 membrane protein no 0.17
    7 PS417_27065 hypothetical protein 0.26 0.16
    8 PS417_15125 glutathione S-transferase no 0.16
    9 PS417_18480 permease no 0.16
    10 PS417_21745 ABC transporter for L-Arginine, substrate-binding component (from data) no 0.16
    11 PS417_26910 membrane protein no 0.16
    12 PS417_01810 ABC transporter permease no 0.16
    13 PS417_16035 ABC transporter substrate-binding protein 0.11 0.16
    14 PS417_14270 phosphate ABC transporter substrate-binding protein no 0.16
    15 PS417_09490 quinone oxidoreductase no 0.15
    16 PS417_19105 hypothetical protein no 0.15
    17 PS417_13940 racemase no 0.15
    18 PS417_21740 ABC transporter for L-Arginine, permease component 1 (from data) no 0.15
    19 PS417_06160 beta-(1-3)-glucosyl transferase no 0.15
    20 PS417_03690 NAD-dependent dehydratase no 0.15

    Or look for negative cofitness