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  • Top cofit genes for GFF2354 from Variovorax sp. SCN45

    FIG00555615: hypothetical protein
    SEED: FIG00555615: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF531 hypothetical protein no 0.85
    2 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) no 0.82
    3 GFF2505 hypothetical protein no 0.82
    4 GFF551 Uncharacterized protein Tbd_1903 no 0.79
    5 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) 0.57 0.79
    6 GFF2152 twitching motility protein PilH 0.91 0.75
    7 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase 0.60 0.70
    8 GFF167 Two-component system sensor histidine kinase no 0.68
    9 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component 0.66 0.68
    10 GFF5429 Iron(III) dicitrate transport protein FecA no 0.64
    11 GFF3627 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.64
    12 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.63
    13 GFF6286 Probable signal peptide protein no 0.62
    14 GFF1526 putative transmembrane sensor no 0.61
    15 GFF2380 Protein phosphatase 2C-like 0.98 0.61
    16 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) no 0.60
    17 GFF494 RND efflux system, membrane fusion protein no 0.60
    18 GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) no 0.60
    19 GFF3618 Transcriptional regulator, LysR family no 0.59
    20 GFF6287 no description no 0.59

    Or look for negative cofitness