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  • Top cofit genes for GFF2353 from Variovorax sp. SCN45

    Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
    SEED: Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
    KEGG: formamidopyrimidine-DNA glycosylase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6556 hypothetical protein no 0.62
    2 GFF1353 Short-chain dehydrogenase/reductase SDR no 0.55
    3 GFF2250 Putative stomatin/prohibitin-family membrane protease subunit aq_911 no 0.55
    4 GFF2028 Uncharacterized MFS-type transporter no 0.55
    5 GFF461 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.55
    6 GFF4796 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) 0.61 0.54
    7 GFF6861 no description no 0.54
    8 GFF6479 hypothetical protein no 0.54
    9 GFF910 hypothetical protein no 0.54
    10 GFF5729 Methyl-accepting chemotaxis sensor/transducer protein 0.36 0.53
    11 GFF627 Secretion protein HlyD no 0.53
    12 GFF6575 Conjugative transfer protein TrbJ no 0.53
    13 GFF198 Isochorismate pyruvate-lyase (EC 4.2.99.21) no 0.53
    14 GFF2851 Phosphoglycerate mutase family protein no 0.53
    15 GFF3146 no description 0.76 0.52
    16 GFF2498 Glutamate N-acetyltransferase (EC 2.3.1.35) @ N-acetylglutamate synthase (EC 2.3.1.1) 0.42 0.52
    17 GFF1689 BUG/TctC family periplasmic protein no 0.52
    18 GFF849 putative carboxylesterase 0.32 0.51
    19 GFF3425 no description no 0.51
    20 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) no 0.51

    Or look for negative cofitness