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Cofit
Protein
Homologs
Top cofit genes for GFF2352 from
Variovorax sp. SCN45
FIG140336: TPR domain protein
SEED: FIG140336: TPR domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6198
D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83)
no
0.65
2
GFF4611
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
0.25
0.64
3
GFF444
Cob(I)alamin adenosyltransferase (EC 2.5.1.17) @ Cob(I)alamin adenosyltransferase (EC 2.5.1.17), clustered with cobalamin synthesis
no
0.62
4
GFF7376
Transcriptional regulator, LysR family
no
0.61
5
GFF5678
Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
0.48
0.60
6
GFF3495
ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.60
7
GFF4639
Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33)
no
0.60
8
GFF6032
Branched-chain amino acid ABC transporter, permease protein LivM (TC 3.A.1.4.1)
no
0.59
9
GFF1992
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
no
0.59
10
GFF2370
L-carnitine dehydratase/bile acid-inducible protein F
no
0.59
11
GFF1797
FIG022199: FAD-binding protein
0.27
0.58
12
GFF2543
Uncharacterized membrane protein Bcep18194_A6058
no
0.58
13
GFF6784
D-amino acid dehydrogenase (EC 1.4.99.6)
no
0.58
14
GFF4779
Broad-specificity amino acid ABC transporter, permease protein 2
no
0.58
15
GFF700
ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.58
16
GFF3755
Transcriptional regulator, GntR family
no
0.58
17
GFF4908
NAD(P) transhydrogenase N-domain of subunit alpha (EC 1.6.1.2)
no
0.57
18
GFF488
ATP-dependent Clp protease ATP-binding subunit ClpX
no
0.57
19
GFF4580
hypothetical protein
no
0.57
20
GFF7293
Ribosome hibernation promoting factor Hpf
0.44
0.57
Or look for
negative cofitness