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  • Top cofit genes for GFF235 from Hydrogenophaga sp. GW460-11-11-14-LB1

    Putative RNA polymerase sigma factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1504 Cardiolipin synthetase (EC 2.7.8.-) no 0.35
    2 GFF3445 Conjugative transfer protein TrbI no 0.32
    3 GFF1128 hypothetical protein no 0.29
    4 GFF916 Beta-lactamase-like no 0.26
    5 GFF2587 Fumarylacetoacetate hydrolase family protein no 0.26
    6 GFF3638 sensory box histidine kinase/response regulator no 0.25
    7 GFF2540 Tyrosine-protein kinase EpsD (EC 2.7.10.2) no 0.25
    8 GFF4230 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) no 0.24
    9 GFF1954 hypothetical protein no 0.24
    10 GFF2753 Chloride channel protein no 0.23
    11 GFF5724 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) no 0.23
    12 GFF4709 Outer membrane protein no 0.23
    13 GFF2463 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases 0.48 0.23
    14 GFF3908 probable oxidoreductase 0.56 0.23
    15 GFF4066 Flagellar motor rotation protein MotA no 0.23
    16 GFF5675 Acyl-CoA thioesterase II (EC 3.1.2.-) no 0.23
    17 GFF2535 FIG003879: Predicted amidohydrolase no 0.23
    18 GFF2277 hypothetical protein no 0.23
    19 GFF5678 putative; ORF located using Glimmer/Genemark no 0.22
    20 GFF2419 Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91) # Periplasmic precursor no 0.22

    Or look for negative cofitness