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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF2345 from
Variovorax sp. SCN45
Uncharacterized ferredoxin-like protein YfhL
SEED: Ferredoxin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7253
Mobile element protein
no
0.58
2
GFF5175
Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.5.2) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)
no
0.58
3
GFF6639
no description
no
0.56
4
GFF1747
FIG00799528: hypothetical protein
no
0.56
5
GFF6089
1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18)
no
0.56
6
GFF6958
no description
no
0.54
7
GFF3136
no description
no
0.52
8
GFF2591
Virulence factor mviM
0.66
0.52
9
GFF3322
hypothetical protein
no
0.52
10
GFF1257
Organosulfonate utilization protein SsuF
no
0.51
11
GFF52
Polyketide synthase modules and related proteins
no
0.51
12
GFF1682
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
no
0.51
13
GFF4224
Transcriptional regulator, AcrR family
no
0.51
14
GFF1440
Multidomain signal transduction protein including CheB-like methylesterase, CheR-like methyltransferase and BaeS-like histidine kinase
no
0.51
15
GFF6323
Benzoate transport protein
no
0.51
16
GFF3368
Pyrimidine permease
0.54
0.51
17
GFF5160
Outer membrane protein W precursor
0.38
0.50
18
GFF3956
no description
no
0.50
19
GFF5806
RNA polymerase ECF-type sigma factor
no
0.50
20
GFF4991
Polyhydroxyalkanoate granule-associated protein PhaF
no
0.50
Or look for
negative cofitness