Top cofit genes for GFF2344 from Variovorax sp. SCN45

ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
SEED: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system permease protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF212 Ribosome association toxin RatA 0.39 0.60
2 GFF5383 DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) no 0.56
3 GFF619 Aspartate carbamoyltransferase (EC 2.1.3.2) no 0.54
4 GFF2320 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) no 0.53
5 GFF5464 Transcriptional regulator, AcrR family no 0.53
6 GFF4112 Rhodanese-related sulfurtransferase, 4 domains no 0.53
7 GFF2756 Ribosylnicotinamide kinase (EC 2.7.1.22) no 0.52
8 GFF1018 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) no 0.52
9 GFF703 Efflux ABC transporter, permease/ATP-binding protein Atu2242 no 0.51
10 GFF6031 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.51
11 GFF5099 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52) no 0.50
12 GFF4392 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.49
13 GFF3034 no description no 0.49
14 GFF670 putative amidase Psyr_2260 no 0.48
15 GFF5384 Proteins containing SET domain no 0.48
16 GFF3645 Peroxiredoxin no 0.48
17 GFF5618 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.48
18 GFF357 SOS-response repressor and protease LexA (EC 3.4.21.88) 0.48 0.48
19 GFF2576 6-carboxy-5,6,7,8-tetrahydropterin synthase (EC 4.1.2.50) no 0.48
20 GFF6427 ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) no 0.48

Or look for negative cofitness