Top cofit genes for GFF2343 from Variovorax sp. SCN45

ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines)
SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system permease protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF2342 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) 0.76 0.67
2 GFF496 Squalene synthase (EC 2.5.1.21) no 0.65
3 GFF990 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) no 0.64
4 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.47 0.64
5 GFF5580 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) no 0.63
6 GFF237 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.59
7 GFF5383 DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) no 0.58
8 GFF6000 hypothetical protein no 0.57
9 GFF212 Ribosome association toxin RatA no 0.57
10 GFF2023 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) no 0.57
11 GFF4553 RNA chaperone ProQ no 0.57
12 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.56
13 GFF5384 Proteins containing SET domain no 0.55
14 GFF1454 Transcriptional regulator, LacI/PurR family no 0.54
15 GFF5434 FIG097052: Sugar transporter no 0.52
16 GFF5135 DNA repair exonuclease family protein YhaO no 0.52
17 GFF5274 Various polyols ABC transporter, permease protein 2 no 0.52
18 GFF3337 16S rRNA (guanine(527)-N(7))-methyltransferase (EC 2.1.1.170) no 0.52
19 GFF1091 Exopolyphosphatase (EC 3.6.1.11) no 0.52
20 GFF341 ATP-dependent Clp protease ATP-binding subunit ClpA no 0.52

Or look for negative cofitness