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  • Top cofit genes for GFF2338 from Variovorax sp. SCN45

    Amidase family protein Atu4441
    SEED: Amidase (EC 3.5.1.4)
    KEGG: aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1223 Aldo/keto reductase, SMc04056 family no 0.58
    2 GFF4302 hypothetical protein AF1210 no 0.58
    3 GFF4794 Ectoine hydroxylase (EC 1.17.-.-) no 0.53
    4 GFF2886 Metallo-beta-lactamase superfamily protein PA0057 no 0.49
    5 GFF3648 putative c'cytochrome no 0.49
    6 GFF1391 Uncharacterized MFS-type transporter no 0.48
    7 GFF1601 no description no 0.48
    8 GFF3338 Threonine efflux protein no 0.48
    9 GFF7221 Protein lysine acetyltransferase Pat (EC 2.3.1.-) no 0.47
    10 GFF2643 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.47
    11 GFF4304 Cyclohexanecarboxylate--CoA ligase no 0.47
    12 GFF2139 Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) no 0.45
    13 GFF2859 Excinuclease ABC subunit C no 0.45
    14 GFF2113 NADH dehydrogenase (EC 1.6.99.3) no 0.44
    15 GFF7271 Transcriptional regulator, LacI family no 0.44
    16 GFF7288 Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) no 0.44
    17 GFF7180 no description no 0.44
    18 GFF345 hypothetical protein no 0.43
    19 GFF4861 Butyryl-CoA dehydrogenase (EC 1.3.8.1) no 0.43
    20 GFF2171 MBL-fold metallohydrolase SPO0683 no 0.42

    Or look for negative cofitness