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  • Top cofit genes for GFF233 from Variovorax sp. SCN45

    Putative activity regulator of membrane protease YbbK
    SEED: Putative activity regulator of membrane protease YbbK

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.61
    2 GFF4955 hypothetical protein no 0.57
    3 GFF457 Nitrilase (EC 3.5.5.7) no 0.56
    4 GFF4407 Alkan-1-ol dehydrogenase, PQQ-dependent (EC 1.1.99.20) no 0.56
    5 GFF4426 Homolog of eukaryotic DNA ligase III no 0.56
    6 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.54
    7 GFF6392 hypothetical protein no 0.53
    8 GFF4409 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.53
    9 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) no 0.53
    10 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.52
    11 GFF557 Plectin 1 no 0.52
    12 GFF4388 Type IV secretory pathway, protease TraF no 0.52
    13 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.52
    14 GFF1145 hypothetical protein no 0.52
    15 GFF2975 SAM-dependent methyltransferase no 0.51
    16 GFF7119 Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA no 0.51
    17 GFF6219 hypothetical protein no 0.51
    18 GFF613 hypothetical protein no 0.50
    19 GFF2504 Cell division protein ZapD no 0.50
    20 GFF994 Cytoskeleton protein RodZ no 0.50

    Or look for negative cofitness