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  • Top cofit genes for GFF2326 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family
    KEGG: LysR family transcriptional regulator, transcriptional activator AphB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3318 KEGG: putative acetyltransferase no 0.60
    2 GFF1418 Transcriptional regulator, LysR family no 0.58
    3 GFF6911 Transcriptional regulator, LacI family no 0.55
    4 GFF7101 hypothetical protein no 0.54
    5 GFF3609 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.54
    6 GFF3934 PhnB protein no 0.54
    7 GFF5354 C4-dicarboxylate transport protein no 0.53
    8 GFF3608 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.52
    9 GFF5978 Nucleoside 2-deoxyribosyltransferase no 0.52
    10 GFF5778 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.51
    11 GFF5587 Acetoin dehydrogenase E1 component alpha-subunit (EC 2.3.1.190) no 0.51
    12 GFF5105 Transcriptional regulator, MerR family no 0.50
    13 GFF7309 Transcriptional regulator, LysR family no 0.50
    14 GFF6524 Zinc-regulated outer membrane receptor no 0.49
    15 GFF5546 Lactam utilization protein LamB no 0.49
    16 GFF4778 Broad-specificity amino acid ABC transporter, permease protein 1 no 0.48
    17 GFF6567 hypothetical protein no 0.48
    18 GFF5047 hypothetical protein no 0.48
    19 GFF3876 UTP pyrophosphatase (EC 3.6.1.9) no 0.48
    20 GFF214 Putative transmembrane protein no 0.48

    Or look for negative cofitness