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  • Top cofit genes for PS417_11840 from Pseudomonas simiae WCS417

    GntR family transcriptional regulator
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
    KEGG: GntR family transcriptional regulator / MocR family aminotransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11900 conjugal transfer protein TraR no 0.27
    2 PS417_26525 DEAD/DEAH box helicase no 0.26
    3 PS417_10960 quinate dehydrogenase no 0.25
    4 PS417_00180 tryptophan synthase subunit alpha 0.27 0.24
    5 PS417_16780 ABC transporter permease no 0.24
    6 PS417_27010 threonine dehydratase no 0.24
    7 PS417_26445 ArsR family transcriptional regulator no 0.24
    8 PS417_10490 delta-aminolevulinic acid dehydratase no 0.24
    9 PS417_03910 pilus assembly protein no 0.23
    10 PS417_00185 tryptophan synthase subunit beta 0.24 0.23
    11 PS417_05940 spermidine/putrescine ABC transporter substrate-binding protein no 0.23
    12 PS417_26055 cyclic nucleotide-binding protein no 0.23
    13 PS417_20105 glycosyl transferase no 0.23
    14 PS417_20095 hypothetical protein no 0.23
    15 PS417_05635 membrane protein no 0.23
    16 PS417_02435 flagellar motor protein MotA no 0.23
    17 PS417_28370 cadmium ABC transporter ATPase no 0.22
    18 PS417_24840 hypothetical protein no 0.22
    19 PS417_16700 hypothetical protein no 0.22
    20 PS417_16010 alkanesulfonate monooxygenase no 0.22

    Or look for negative cofitness