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  • Top cofit genes for PS417_11825 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: DNA-binding response regulator
    KEGG: two-component system, OmpR family, response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21515 transcriptional regulator no 0.61
    2 PS417_17290 RND transporter no 0.58
    3 PS417_17300 RND transporter no 0.57
    4 PS417_14960 ATPase no 0.57
    5 PS417_14965 transcriptional regulator no 0.55
    6 PS417_17295 RND transporter MFP subunit no 0.53
    7 PS417_02145 potassium transporter KefA no 0.53
    8 PS417_13805 4-amino-4-deoxy-L-arabinose transferase no 0.49
    9 PS417_14945 beta-lactamase 0.75 0.49
    10 PS417_04690 transcriptional regulator 0.53 0.46
    11 PS417_11820 histidine kinase 0.93 0.45
    12 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase no 0.45
    13 PS417_13820 UDP-glucose 6-dehydrogenase no 0.45
    14 PS417_04275 hypothetical protein 0.25 0.42
    15 PS417_22535 ornithine acetyltransferase 0.75 0.41
    16 PS417_04105 ABC transporter ATP-binding protein 0.25 0.41
    17 PS417_07035 uracil-DNA glycosylase 0.36 0.40
    18 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.52 0.40
    19 PS417_08000 beta-hydroxylase no 0.39
    20 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase no 0.38

    Or look for negative cofitness