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  • Top cofit genes for GFF2317 from Sphingobium sp. HT1-2

    RNA polymerase ECF-type sigma factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF206 hypothetical protein no 0.80
    2 GFF2028 hypothetical protein no 0.78
    3 GFF2081 hypothetical protein no 0.72
    4 GFF5397 Mobile element protein no 0.72
    5 GFF2723 Two-component transcriptional response regulator, OmpR family no 0.71
    6 GFF5228 Ribose-phosphate pyrophosphokinase, possible alternative form 2 no 0.70
    7 GFF1414 Low-affinity inorganic phosphate transporter no 0.67
    8 GFF2795 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.67
    9 GFF1426 hypothetical protein no 0.63
    10 GFF1635 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) no 0.63
    11 GFF4211 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) no 0.62
    12 GFF517 Carboxypeptidase-related protein no 0.62
    13 GFF1305 hypothetical protein no 0.62
    14 GFF2012 Integrase no 0.61
    15 GFF4809 hypothetical protein no 0.60
    16 GFF1985 Transcriptional regulator, ArsR family no 0.60
    17 GFF5062 Flavohemoglobin / Nitric oxide dioxygenase (EC 1.14.12.17) no 0.59
    18 GFF4138 hypothetical protein no 0.59
    19 GFF2800 Cytochrome b no 0.59
    20 GFF2642 hypothetical protein no 0.59

    Or look for negative cofitness