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  • Top cofit genes for GFF231 from Variovorax sp. SCN45

    DNA ligase (ATP) (EC 6.5.1.1)
    SEED: DNA ligase (ATP) (EC 6.5.1.1)
    KEGG: DNA ligase (ATP)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF418 Endonuclease III (EC 4.2.99.18) no 0.57
    2 GFF513 Chitinase (EC 3.2.1.14) no 0.53
    3 GFF5845 NAD synthetase (EC 6.3.1.5) no 0.53
    4 GFF1641 Polyketide synthase modules and related proteins no 0.51
    5 GFF164 DinG family ATP-dependent helicase CPE1197 no 0.50
    6 GFF4782 Pyridoxal-5'-phosphate-dependent enzyme beta superfamily (fold type II) no 0.50
    7 GFF4400 hypothetical protein no 0.50
    8 GFF3762 hypothetical protein no 0.48
    9 GFF5831 Ketosteroid isomerase-related protein no 0.47
    10 GFF2284 FIG00538168: hypothetical protein no 0.47
    11 GFF5355 no description no 0.47
    12 GFF1843 Xanthine/uracil/thiamine/ascorbate permease family protein no 0.46
    13 GFF6341 no description no 0.46
    14 GFF1517 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter no 0.45
    15 GFF5438 Glutathione peroxidase (EC 1.11.1.9) no 0.45
    16 GFF2168 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.44
    17 GFF1805 Transcriptional regulator, GntR family no 0.44
    18 GFF4178 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) no 0.44
    19 GFF2988 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) no 0.43
    20 GFF2531 Transcriptional regulator, AsnC family no 0.43

    Or look for negative cofitness