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  • Top cofit genes for GFF2305 from Variovorax sp. SCN45

    Hypothetical protein in cytochrome oxidase biogenesis cluster
    SEED: Probable transmembrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2442 RND efflux system, membrane fusion protein no 0.59
    2 GFF4443 Cytochrome c-type biogenesis protein ResA no 0.55
    3 GFF1638 Siderophore biosynthesis non-ribosomal peptide synthetase modules no 0.55
    4 GFF7042 Acetyltransferase, GNAT family no 0.55
    5 GFF4661 no description no 0.54
    6 GFF3002 Cobalt-containing nitrile hydratase subunit beta (EC 4.2.1.84) no 0.52
    7 GFF7248 no description no 0.52
    8 GFF5266 Transaldolase (EC 2.2.1.2) 0.33 0.51
    9 GFF2261 Adenylate cyclase (EC 4.6.1.1) no 0.51
    10 GFF3735 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) no 0.51
    11 GFF3787 Biotin carboxylase (EC 6.3.4.14) no 0.51
    12 GFF6886 DNA-binding transcriptional regulator, MocR family / aminotransferase domain no 0.49
    13 GFF2640 PKHD-type hydroxylase YbiX no 0.49
    14 GFF2999 Putative transmembrane protein no 0.48
    15 GFF5279 Fructokinase (EC 2.7.1.4) no 0.48
    16 GFF7046 FIG00854755: hypothetical protein no 0.48
    17 GFF4571 Acyl-CoA dehydrogenase family protein no 0.47
    18 GFF3254 Phosphotransferase involved in threonylcarbamoyladenosine t(6)A37 formation in tRNA 0.41 0.47
    19 GFF6312 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.47
    20 GFF2677 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.30 0.47

    Or look for negative cofitness