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  • Top cofit genes for GFF2303 from Variovorax sp. SCN45

    Uncharacterized DUF2909 protein BB4826
    SEED: Probable transmembrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1656 hypothetical protein no 0.60
    2 GFF5409 FIG00576366: hypothetical protein no 0.59
    3 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.59
    4 GFF4767 Efflux ABC transporter, permease/ATP-binding protein no 0.59
    5 GFF4955 hypothetical protein no 0.59
    6 GFF2683 Protein containing domains DUF404, DUF407 no 0.58
    7 GFF2613 no description no 0.58
    8 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.57
    9 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.57
    10 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.57
    11 GFF274 Probable RNA methyltransferase PA1839 no 0.56
    12 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.56
    13 GFF183 Virulence protein no 0.55
    14 GFF3368 Pyrimidine permease no 0.55
    15 GFF5497 MBL-fold metallo-hydrolase superfamily no 0.55
    16 GFF5121 Probable signal peptide protein no 0.55
    17 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family no 0.54
    18 GFF907 Transcriptional regulator, LysR family no 0.54
    19 GFF5248 Outer membrane porin protein 32 precursor no 0.54
    20 GFF6448 Glucans biosynthesis protein D precursor no 0.54

    Or look for negative cofitness