Top cofit genes for GFF2303 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Putative uncharacterized protein YiiQ
SEED: Putative uncharacterized protein YiiQ

Rank Hit Name Description Conserved? Cofitness  
1 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) 0.92 0.88
2 GFF3054 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC 0.61 0.87
3 GFF1058 NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) 0.31 0.87
4 GFF3794 SanA protein 0.83 0.86
5 GFF3397 Transcription-repair coupling factor 0.86 0.85
6 GFF4839 BarA sensory histidine kinase (= VarS = GacS) 0.75 0.84
7 GFF1423 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) no 0.84
8 GFF3886 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.89 0.84
9 GFF1311 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated no 0.84
10 GFF4286 Shikimate kinase III (EC 2.7.1.71) 0.13 0.83
11 GFF662 Pectinesterase (EC 3.1.1.11) 0.95 0.82
12 GFF3613 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps no 0.82
13 GFF2698 Exoribonuclease II (EC 3.1.13.1) no 0.81
14 GFF4788 RNA polymerase sigma factor RpoS no 0.80
15 GFF1815 Electron transport complex protein RnfA 0.52 0.79
16 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no 0.79
17 GFF1396 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.75 0.79
18 GFF2885 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) no 0.79
19 GFF3874 Colanic acid biosynthesis acetyltransferase WcaF (EC 2.3.1.-) no 0.79
20 GFF3533 FIG00638687: hypothetical protein no 0.78

Or look for negative cofitness