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  • Top cofit genes for GFF2296 from Variovorax sp. SCN45

    Putative transmembrane protein
    SEED: Probable transmembrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6737 Uncharacterized aldehyde oxidase, 2Fe-2S subunit no 0.70
    2 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) no 0.66
    3 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) no 0.65
    4 GFF2885 Transcriptional regulator, LysR family no 0.60
    5 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.60
    6 GFF5118 gluconolactonase family protein no 0.60
    7 GFF2183 Outer membrane component of TAM transport system no 0.60
    8 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.59
    9 GFF2683 Protein containing domains DUF404, DUF407 no 0.59
    10 GFF2379 Serine/threonine protein kinase 0.56 0.56
    11 GFF3181 FIG005069: Hypothetical protein no 0.56
    12 GFF2520 UPF0053 inner membrane protein YtfL no 0.56
    13 GFF5210 hypothetical protein no 0.56
    14 GFF6890 Threonine efflux protein no 0.56
    15 GFF4485 FIG00715336: hypothetical protein 0.56 0.55
    16 GFF1154 Putative transmembrane protein 0.28 0.55
    17 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.55
    18 GFF2458 CzcABC family efflux RND transporter, membrane fusion protein no 0.55
    19 GFF5994 Chlorogenate esterase no 0.55
    20 GFF5811 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB-like no 0.55

    Or look for negative cofitness