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  • Top cofit genes for PS417_11700 from Pseudomonas simiae WCS417

    ligand-gated channel
    SEED: Outer membrane ferripyoverdine receptor FpvA, TonB-dependent
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01495 amino acid ABC transporter 0.59 0.45
    2 PS417_19940 membrane protein no 0.45
    3 PS417_00710 fusaric acid resistance protein no 0.42
    4 PS417_16910 multidrug resistance protein B no 0.42
    5 PS417_08835 ABC transporter no 0.41
    6 PS417_16915 hemolysin D no 0.39
    7 PS417_21825 hydrolase no 0.37
    8 PS417_08840 serine/threonine protein kinase no 0.37
    9 PS417_00715 required for octanoate transport, together with NodT, MFP, and FUSC proteins (PS417_00725, PS417_00720, PS417_00710) (from data) no 0.37
    10 PS417_00720 membrane protein no 0.36
    11 PS417_16920 multidrug RND transporter no 0.34
    12 PS417_21095 membrane protein no 0.34
    13 PS417_21100 alpha-L-glutamate ligase no 0.33
    14 PS417_00725 RND transporter no 0.32
    15 PS417_25960 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) no 0.31
    16 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase no 0.31
    17 PS417_02690 N-acylglucosamine 2-epimerase 0.16 0.31
    18 PS417_06770 multidrug transporter no 0.29
    19 PS417_17390 DSBA oxidoreductase no 0.29
    20 PS417_23575 hypothetical protein no 0.29

    Or look for negative cofitness