Top cofit genes for GFF2285 from Variovorax sp. SCN45

Transcriptional regulator, RpiR family
SEED: Transcriptional regulator, RpiR family

Rank Hit Name Description Conserved? Cofitness  
1 GFF4653 Cytochrome c peroxidase (EC 1.11.1.5) no 0.72
2 GFF2006 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) no 0.70
3 GFF7179 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.37 0.66
4 GFF966 Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) 0.28 0.65
5 GFF2847 histone-like nucleoid-structuring protein H-NS no 0.64
6 GFF6780 Energy-dependent translational throttle protein EttA 0.62 0.63
7 GFF3404 Benzoyl-CoA-dihydrodiol lyase (EC 4.1.2.44) no 0.63
8 GFF2598 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) no 0.62
9 GFF1155 Putative transmembrane protein no 0.62
10 GFF211 protein of unknown function UPF0125 no 0.62
11 GFF4768 Transcriptional regulator, MarR family no 0.62
12 GFF2623 Aspartate aminotransferase no 0.61
13 GFF3653 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 0.29 0.61
14 GFF4043 Copper sensory histidine kinase CusS no 0.60
15 GFF3388 Transcriptional regulator, AcrR family no 0.60
16 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.26 0.59
17 GFF254 N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17), type 2 no 0.58
18 GFF3600 Pantothenate kinase type III, CoaX-like (EC 2.7.1.33) no 0.58
19 GFF4893 FIG00640418: hypothetical protein no 0.58
20 GFF4977 Transcriptional regulator for ferulate or vanillate catabolism no 0.58

Or look for negative cofitness