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  • Top cofit genes for GFF2275 from Variovorax sp. SCN45

    3-methylmercaptopropionyl-CoA dehydrogenase (DmdC)
    SEED: Acyl-CoA dehydrogenase (EC 1.3.8.7)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1240 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.56
    2 GFF6861 no description no 0.56
    3 GFF2960 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.55
    4 GFF2554 Integral membrane protein no 0.54
    5 GFF2692 hypothetical protein no 0.54
    6 GFF4164 Thymidine phosphorylase (EC 2.4.2.4) no 0.54
    7 GFF1149 FIG110192: hypothetical protein 0.31 0.52
    8 GFF2718 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.51
    9 GFF4533 Multidrug resistance transporter, Bcr/CflA family no 0.51
    10 GFF1864 Transcriptional regulator, LysR family no 0.51
    11 GFF2859 Excinuclease ABC subunit C no 0.51
    12 GFF1740 Transcriptional regulator, LysR family no 0.51
    13 GFF6300 CaiB/BaiF family protein no 0.50
    14 GFF2602 no description no 0.50
    15 GFF784 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.49
    16 GFF4137 Methionine ABC transporter substrate-binding protein no 0.49
    17 GFF4304 Cyclohexanecarboxylate--CoA ligase no 0.48
    18 GFF4288 Acyl-CoA dehydrogenase no 0.48
    19 GFF3787 Biotin carboxylase (EC 6.3.4.14) no 0.48
    20 GFF1185 Transcriptional regulator, AraC family no 0.47

    Or look for negative cofitness