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  • Top cofit genes for GFF2269 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: putative transmembrane efflux protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4992 Transcriptional regulator, AcrR family 0.38 0.51
    2 GFF2253 no description no 0.49
    3 GFF3224 no description no 0.48
    4 GFF4490 Site-specific tyrosine recombinase XerC no 0.47
    5 GFF4588 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) no 0.47
    6 GFF1437 Transcriptional regulator, LysR family no 0.46
    7 GFF4463 alpha-methyl-L-serine aldolase no 0.46
    8 GFF1791 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.46
    9 GFF5353 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.45
    10 GFF823 Inner membrane protein YbaL, KefB/KefC family no 0.45
    11 GFF181 Protein of unknown function (DUF1501) no 0.45
    12 GFF1835 Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8) no 0.45
    13 GFF2178 Methyl-accepting chemotaxis sensor/transducer protein no 0.44
    14 GFF4328 hypothetical protein no 0.43
    15 GFF6928 Putative transmembrane protein no 0.43
    16 GFF518 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 0.18 0.43
    17 GFF5831 Ketosteroid isomerase-related protein no 0.43
    18 GFF2763 33 kDa chaperonin HslO 0.35 0.43
    19 GFF200 Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB no 0.43
    20 GFF5027 Aldehyde dehydrogenase B (EC 1.2.1.22) 0.25 0.43

    Or look for negative cofitness