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  • Top cofit genes for PS417_11515 from Pseudomonas simiae WCS417

    sugar ABC transporter substrate-binding protein
    SEED: Various polyols ABC transporter, periplasmic substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11520 Sorbitol dehydrogenase (EC 1.1.1.14) (from data) 0.98 0.40
    2 PS417_02770 membrane protein no 0.22
    3 PS417_12715 ABC transporter for D-Mannitol and D-Sorbitol, periplasmic substrate-binding protein (from data) 0.43 0.21
    4 PS417_06115 multidrug transporter AcrB no 0.20
    5 PS417_10570 cysteine protease no 0.19
    6 PS417_15610 GDP-mannose pyrophosphatase 0.39 0.19
    7 PS417_12710 ABC transporter for D-Mannitol and D-Sorbitol, permease component 2 (from data) 0.98 0.19
    8 PS417_06125 hypothetical protein no 0.19
    9 PS417_11315 hemagglutinin no 0.19
    10 PS417_19600 exonuclease no 0.19
    11 PS417_19630 LuxR family transcriptional regulator no 0.18
    12 PS417_09500 glucose 1-dehydrogenase no 0.18
    13 PS417_15750 protease no 0.18
    14 PS417_04940 outer membrane usher protein no 0.17
    15 PS417_14325 AraC family transcriptional regulator no 0.17
    16 PS417_05035 hypothetical protein no 0.16
    17 PS417_05430 cytochrome B6 no 0.16
    18 PS417_23405 transcriptional regulator no 0.16
    19 PS417_06110 RND transporter no 0.16
    20 PS417_18820 methylmalonyl-CoA epimerase no 0.16

    Or look for negative cofitness