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  • Top cofit genes for GFF2253 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6928 Putative transmembrane protein no 0.67
    2 GFF3865 Sigma factor RpoE negative regulatory protein RseB precursor no 0.66
    3 GFF3022 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.61
    4 GFF446 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) no 0.61
    5 GFF7363 hypothetical protein no 0.60
    6 GFF2567 Molybdopterin-synthase adenylyltransferase (EC 2.7.7.80) no 0.59
    7 GFF1371 Fe-S protein, homolog of lactate dehydrogenase SO1521 no 0.59
    8 GFF1191 Predicted hydroxymethylpyrimidine transporter CytX no 0.58
    9 GFF945 Excinuclease ABC subunit B no 0.58
    10 GFF6065 Two-component transcriptional response regulator receiver domain no 0.57
    11 GFF1188 Thiazole synthase (EC 2.8.1.10) no 0.57
    12 GFF3592 hypothetical protein no 0.57
    13 GFF1187 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) no 0.56
    14 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) no 0.56
    15 GFF997 UPF0070 protein YfgM no 0.56
    16 GFF2239 no description no 0.56
    17 GFF5465 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) no 0.56
    18 GFF782 Alpha-ketoglutarate-dependent dioxygenase AlkB (EC 1.14.11.33) no 0.55
    19 GFF3231 hypothetical protein no 0.55
    20 GFF4383 hypothetical protein no 0.55

    Or look for negative cofitness