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  • Top cofit genes for GFF2252 from Variovorax sp. SCN45

    RNA-2',3'-PO4:RNA-5'-OH ligase
    SEED: Protein RtcB
    KEGG: protein RtcB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF236 Two-component transcriptional response regulator receiver domain no 0.66
    2 GFF3624 Putative transmembrane protein 0.48 0.60
    3 GFF3625 Ferredoxin, 2Fe-2S no 0.57
    4 GFF649 no description no 0.57
    5 GFF4790 Nudix-related transcriptional regulator NrtR 0.76 0.57
    6 GFF651 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) no 0.56
    7 GFF3621 Magnesium and cobalt transport protein CorA no 0.56
    8 GFF3618 Transcriptional regulator, LysR family no 0.53
    9 GFF3619 no description no 0.53
    10 GFF2563 Two-component system sensor histidine kinase 0.48 0.52
    11 GFF2630 Ligand-binding SRPBCC domain protein family no 0.51
    12 GFF3616 2-hydroxychromene-2-carboxylate isomerase family protein no 0.51
    13 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 no 0.50
    14 GFF5806 RNA polymerase ECF-type sigma factor no 0.47
    15 GFF726 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) periplasmic (secreted in GramPositives) no 0.46
    16 GFF212 Ribosome association toxin RatA no 0.46
    17 GFF89 hypothetical protein no 0.46
    18 GFF5136 Putative DNA helicase no 0.45
    19 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) no 0.45
    20 GFF1512 no description no 0.44

    Or look for negative cofitness