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  • Top cofit genes for GFF2250 from Variovorax sp. SCN45

    Putative stomatin/prohibitin-family membrane protease subunit aq_911
    SEED: Putative stomatin/prohibitin-family membrane protease subunit aq_911

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF627 Secretion protein HlyD no 0.65
    2 GFF3692 ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.64
    3 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) 0.26 0.61
    4 GFF932 Acetyltransferase, GNAT family no 0.60
    5 GFF426 Cobyric acid synthase (EC 6.3.5.10) no 0.59
    6 GFF445 Ferrichrome transport ATP-binding protein FhuC no 0.58
    7 GFF2357 DNA repair protein RecN no 0.57
    8 GFF7376 Transcriptional regulator, LysR family no 0.57
    9 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) no 0.57
    10 GFF4634 Transketolase, C-terminal section (EC 2.2.1.1) no 0.57
    11 GFF1762 no description no 0.56
    12 GFF6653 Aminotransferase, class III no 0.56
    13 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) no 0.55
    14 GFF669 BUG/TctC family periplasmic protein no 0.55
    15 GFF3160 Transcriptional regulator YeiE, LysR family no 0.55
    16 GFF2498 Glutamate N-acetyltransferase (EC 2.3.1.35) @ N-acetylglutamate synthase (EC 2.3.1.1) no 0.55
    17 GFF1166 Murein-DD-endopeptidase (EC 3.4.99.-) no 0.55
    18 GFF1002 HflK protein no 0.55
    19 GFF3415 Cyclase no 0.54
    20 GFF2468 Outer membrane protein assembly factor YaeT no 0.54

    Or look for negative cofitness